STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0233PFAM: ATP-binding region ATPase domain protein; KEGG: ace:Acel_2037 putative anti-sigma regulatory factor, serine/threonine protein kinase. (347 aa)    
Predicted Functional Partners:
Krad_0097
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV3761 hypothetical protein.
 
    0.772
Krad_1570
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV3761 hypothetical protein.
 
    0.771
Krad_3741
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sco:SCO4412 regulatory protein.
 
    0.770
Krad_0777
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: fal:FRAAL3925 hypothetical protein.
 
    0.761
Krad_2031
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV437 magnesium or manganese-dependent protein phosphatase.
 
    0.757
Krad_1581
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sco:SCO4120 hypothetical protein.
  
     0.755
Krad_1671
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mag:amb3387 sensor protein FixL.
   
 
 0.645
Krad_1230
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sma:SAV2970 two-component system response regulator.
 
   0.615
Krad_0232
Stage II sporulation E family protein; PFAM: histidine kinase HAMP region domain protein; CHASE3 domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fra:Francci3_1176 stage II sporulation E.
  
    0.577
Krad_3966
KEGG: fra:Francci3_0675 hypothetical protein.
  
     0.518
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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