STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0280KEGG: art:Arth_3000 phage shock protein C, PspC. (491 aa)    
Predicted Functional Partners:
Krad_0278
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PspC domain protein; KEGG: art:Arth_2999 putative signal transduction histidine kinase.
 
  
 0.933
Krad_0277
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sma:SAV3470 two-component system response regulator.
 
  
 0.782
Krad_0279
PFAM: PspC domain protein; KEGG: art:Arth_3000 phage shock protein C, PspC.
 
    
0.782
Krad_0281
Hypothetical protein.
       0.773
Krad_0282
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.768
Krad_1451
Phage shock protein A, PspA; PFAM: PspA/IM30 family protein; KEGG: aau:AAur_2727 PspA/IM30 family protein.
  
 
 0.725
Krad_3697
KEGG: aau:AAur_2856 hypothetical protein.
  
     0.466
Krad_2618
KEGG: rha:RHA1_ro03341 hypothetical protein.
  
     0.444
Krad_0083
KEGG: rha:RHA1_ro03341 hypothetical protein.
  
     0.433
Krad_0276
Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rha:RHA1_ro02992 probable inositol 2-dehydrogenase.
       0.431
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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