STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0298PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pca:Pcar_2333 glycerophosphoryl diester phosphodiesterase-like. (308 aa)    
Predicted Functional Partners:
Krad_1894
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: art:Arth_0112 glycerophosphoryl diester phosphodiesterase.
  
  
 
0.928
Krad_3613
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pac:PPA1839 glycerophosphoryl diester phosphodiesterase.
  
  
 
0.910
Krad_0297
PFAM: extracellular solute-binding protein family 1; KEGG: art:Arth_2948 extracellular solute-binding protein.
 
    0.827
Krad_0296
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_2925 sn-glycerol-3-phosphate-binding protein.
 
  
 0.773
Krad_0295
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_2946 binding-protein-dependent transport systems inner membrane component.
 
  
 0.769
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.536
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.532
Krad_1009
PFAM: FAD dependent oxidoreductase; KEGG: sma:SAV5003 putative glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 
 0.472
Krad_0294
PFAM: Formamidopyrimidine-DNA glycolase; KEGG: fal:FRAAL5723 endonuclease VIII.
       0.441
Krad_1007
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: sma:SAV7200 putative transport integral membrane protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.403
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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