STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0303PFAM: extracellular solute-binding protein family 1. (478 aa)    
Predicted Functional Partners:
Krad_0302
PFAM: binding-protein-dependent transport systems inner membrane component.
  0.994
Krad_0301
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV6355 putative integral membrane sugar transport protein.
 
 0.987
Krad_0295
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_2946 binding-protein-dependent transport systems inner membrane component.
 
 0.937
Krad_0916
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aau:AAur_0929 putative sugar ABC transportor, ATP-binding protein.
  
 0.896
Krad_1116
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_2541 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
  
 0.896
Krad_2093
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mkm:Mkms_2603 ABC transporter related; Belongs to the ABC transporter superfamily.
  
 0.896
Krad_0304
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein.
 
     0.817
Krad_0300
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: csa:Csal_0643 mannitol dehydrogenase-like protein.
 
     0.790
Krad_1461
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: msm:MSMEG_3606 transcriptional regulator.
 
     0.639
Krad_4205
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mpa:MAP0879c hypothetical protein.
 
     0.546
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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