STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0312PFAM: protein of unknown function DUF742. (131 aa)    
Predicted Functional Partners:
Krad_0313
PFAM: protein of unknown function ATP binding.
 
  
 0.976
Krad_3503
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: sco:SCO6026 fatty acid oxidation complex alpha-subunit.
  
 0.975
Krad_0311
PFAM: Roadblock/LC7 family protein.
 
  
 0.961
Krad_0310
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein.
 
 
 0.920
Krad_3845
PFAM: protein of unknown function ATP binding; KEGG: sma:SAV2182 ATP/GTP-binding protein.
 
  
 0.893
Krad_3042
KEGG: ace:Acel_1323 small GTP-binding protein.
 
  
 0.853
Krad_3847
PFAM: Roadblock/LC7 family protein; KEGG: sma:SAV2695 hypothetical protein.
 
  
 0.838
Krad_3848
PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: nfa:nfa49650 putative histidine kinase.
 
 
 0.832
Krad_0658
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: art:Arth_2741 electron transfer flavoprotein, alpha subunit.
  
 
 0.775
Krad_3846
KEGG: rha:RHA1_ro02080 hypothetical protein.
  
     0.773
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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