STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0315PFAM: CheW domain protein. (146 aa)    
Predicted Functional Partners:
Krad_0314
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein.
 0.999
Krad_1851
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rru:Rru_A2327 CheA signal transduction histidine kinases (STHK).
 0.995
Krad_1217
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pca:Pcar_1336 putative methyl-accepting chemotaxis protein (MCP).
 
 0.987
Krad_4077
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: nca:Noca_2984 chemotaxis sensory transducer.
 
 0.981
Krad_0344
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer.
 
 0.975
Krad_1606
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: nca:Noca_2984 chemotaxis sensory transducer.
 
 0.975
Krad_1854
PFAM: chemotaxis sensory transducer; KEGG: dar:Daro_1140 chemotaxis sensory transducer.
 
 0.975
Krad_1914
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: nca:Noca_2984 chemotaxis sensory transducer.
 
 0.975
Krad_1935
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: nca:Noca_3602 chemotaxis sensory transducer.
 
 0.975
Krad_3504
PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dps:DP2705 related to methyl-accepting chemotaxis protein.
 
 0.975
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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