STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0347TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; protein phosphatase 2C domain protein. (723 aa)    
Predicted Functional Partners:
Krad_0232
Stage II sporulation E family protein; PFAM: histidine kinase HAMP region domain protein; CHASE3 domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fra:Francci3_1176 stage II sporulation E.
 
  
 0.808
Krad_0121
Putative PAS/PAC sensor protein; PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
 
 0.690
Krad_0483
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.665
Krad_4113
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: ret:RHE_CH02345 hypothetical protein.
 
 
 0.662
Krad_0207
Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sma:SAV4394 magnesium or manganese-dependent protein phosphatase.
 
 
0.655
Krad_0122
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4021 putative sigma factor PP2C-like phosphatases.
  
    0.652
Krad_4323
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; KEGG: fal:FRAAL6490 hypothetical protein.
 
 
0.634
Krad_2194
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: nfa:nfa2970 hypothetical protein.
  
    0.609
Krad_0097
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV3761 hypothetical protein.
 
 
 0.581
Krad_4348
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV3223 magnesium or manganese-dependent protein phosphatase.
 
 
 0.579
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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