STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0383PFAM: peptidase S8 and S53 subtilisin kexin sedolisin. (425 aa)    
Predicted Functional Partners:
Krad_3123
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: sco:SCO4508 cell division-related protein.
  
 
 0.797
Krad_3546
PFAM: putative cell wall binding repeat 2-containing protein; KEGG: ace:Acel_1461 putative cell wall binding repeat 2-containing protein.
 
      0.751
Krad_2862
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: art:Arth_1867 AAA ATPase, central domain protein.
 
  
 0.568
Krad_4111
PFAM: cutinase; KEGG: mul:MUL_0856 cutinase precursor, Cut3.
   
 
 0.552
Krad_3899
PFAM: putative cell wall binding repeat 2-containing protein; KEGG: ace:Acel_1461 putative cell wall binding repeat 2-containing protein.
 
      0.518
Krad_0161
PFAM: putative cell wall binding repeat 2-containing protein; KEGG: ctc:CTC00504 cwp66 homolog/N-acetylmuramoyl-L-alanine amidase.
 
      0.517
Krad_0384
PFAM: regulatory protein LacI.
  
    0.495
Krad_3790
PFAM: Forkhead-associated protein; cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: ace:Acel_1741 FHA domain containing protein.
  
 
 0.430
Krad_3624
KEGG: blo:BL0003 hypothetical protein; Belongs to the WXG100 family.
     
 0.419
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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