STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0384PFAM: regulatory protein LacI. (339 aa)    
Predicted Functional Partners:
Krad_0549
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV4978 putative LacI-family transcriptional regulator.
  
     0.754
Krad_0971
PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: msm:MSMEG_5143 HTH-type transcriptional regulator DegA.
  
     0.742
Krad_3482
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO0289 probable transcriptional regulator.
  
     0.740
Krad_0114
PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV7422 putative LacI-family transcriptional regulator.
  
     0.733
Krad_1332
PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: art:Arth_3918 transcriptional regulator, LacI family.
  
     0.733
Krad_0922
PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tfu:Tfu_1710 regulatory protein, LacI.
  
     0.731
Krad_4149
PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rle:RL4378 putative LacI family transcriptional regulator.
  
     0.731
Krad_0581
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_1391 periplasmic binding protein/LacI transcriptional regulator.
  
     0.726
Krad_0802
PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rha:RHA1_ro04084 transcriptional regulator, LacI family.
  
     0.723
Krad_1038
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO1066 LacI-family transcriptional regulator.
  
     0.720
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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