STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0418PFAM: alpha/beta hydrolase fold. (305 aa)    
Predicted Functional Partners:
Krad_0419
PFAM: Bile acid:sodium symporter.
  
    0.775
Krad_0417
PFAM: protein of unknown function DUF1469.
       0.693
Krad_0337
PFAM: alpha/beta hydrolase fold.
  
     0.688
Krad_3061
KEGG: sco:SCO1524 hypothetical protein.
  
     0.649
Krad_0728
PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO4746 lipase.
  
   
 0.629
Krad_2306
PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV541 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
  
     0.570
Krad_4138
PFAM: alpha/beta hydrolase fold; KEGG: rpd:RPD_3289 alpha/beta hydrolase fold.
  
     0.556
Krad_3063
PFAM: lipid A biosynthesis acyltransferase; KEGG: sma:SAV6827 lipid A biosynthesis lauroyl acyltransferase.
 
     0.487
Krad_3062
PFAM: glycosyl transferase group 1; KEGG: sma:SAV6828 putative glycosyltransferase.
  
    0.447
Krad_2097
PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV923 hydrolase.
  
     0.430
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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