STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0442PFAM: transport system permease protein; ABC-3 protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (356 aa)    
Predicted Functional Partners:
Krad_0443
PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.997
Krad_0441
PFAM: periplasmic binding protein.
 
 0.990
Krad_1239
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_0336 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components.
 
 0.985
Krad_3501
PFAM: periplasmic binding protein; KEGG: rxy:Rxyl_0419 periplasmic binding protein.
 
 
 0.772
Krad_3654
PFAM: periplasmic binding protein; KEGG: rha:RHA1_ro06445 ABC Fe(3+) transporter, substrate binding component.
 
 
 0.769
Krad_3909
PFAM: periplasmic binding protein; KEGG: rha:RHA1_ro06845 ABC Fe(3+) transporter, substrate binding component.
 
 
 0.764
Krad_0807
PFAM: periplasmic binding protein; KEGG: msm:MSMEG_0020 periplasmic binding protein.
 
 
 0.758
Krad_2670
PFAM: periplasmic binding protein; KEGG: cgb:cg1418 ABC-type cobalamin/Fe3+-siderophores transport system secreted component.
 
 
 0.749
Krad_3705
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cjk:jk1884 ABC-type enterochelin transport system ATPase component.
 
  
 0.669
Krad_0444
Conserved hypothetical protein.
       0.592
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.