STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0501PFAM: regulatory protein ArsR; KEGG: fra:Francci3_3239 transcriptional regulator, ArsR family. (127 aa)    
Predicted Functional Partners:
Krad_0500
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: nfa:pnf2260 putative arsenate reductase.
 
  
 0.827
Krad_0502
TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: art:Arth_0212 arsenical-resistance protein.
  
 0.805
Krad_0499
TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rpb:RPB_2178 chromate transporter.
     
 0.735
Krad_0498
PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: sco:SCO0965 hypothetical protein.
       0.479
Krad_3370
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: rha:RHA1_ro01222 Fe(3+) uptake regulation protein; Belongs to the Fur family.
  
  
 0.461
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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