STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0515PFAM: sodium:dicarboxylate symporter; KEGG: mva:Mvan_4696 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (456 aa)    
Predicted Functional Partners:
Krad_0516
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; KEGG: nfa:nfa46340 putative two-component system sensor kinase.
 
  
 0.856
Krad_0517
Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; KEGG: sma:SAV2817 putative two-component system response regulator.
 
   
 0.812
Krad_2961
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: nca:Noca_3022 glutamate synthase (ferredoxin).
     
 0.744
Krad_3953
Succinate dehydrogenase hydrophobic anchor subunit-like; KEGG: art:Arth_1130 putative succinate dehydrogenase membrane subunit.
   
  
 0.655
Krad_0064
Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; KEGG: fal:FRAAL2991 putative two-component system response regulator.
 
   
 0.529
Krad_0065
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO5829 putative two-component sensor.
 
  
 0.486
Krad_0519
KEGG: rxy:Rxyl_0609 putative amino acid transporter.
  
 
 0.477
Krad_1228
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase central region; KEGG: art:Arth_2645 2-oxoglutarate dehydrogenase, E1 subunit.
  
 
 0.463
Krad_0518
PFAM: protein of unknown function UPF0118; KEGG: rha:RHA1_ro00086 hypothetical protein.
       0.445
Krad_3709
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na?? symporter; KEGG: nfa:nfa45040 putative transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.428
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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