STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0563PFAM: lipopolysaccharide biosynthesis protein; KEGG: mva:Mvan_1681 lipopolysaccharide biosynthesis. (483 aa)    
Predicted Functional Partners:
Krad_0013
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: rha:RHA1_ro05742 sugar transferase.
  
  
 0.887
Krad_2362
KEGG: sco:SCO0901 hypothetical protein.
  
 
 0.878
Krad_3890
PFAM: glycosyl transferase family 2; KEGG: aau:AAur_2603 putative glycosyl transferase, group 2 family domain protein.
  
  
 0.487
Krad_0561
PFAM: transferase hexapeptide repeat containing protein; KEGG: cdi:DIP1891 serine acetyltransferase.
  
  
 0.483
Krad_0012
Non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05453 probable protein-tyrosine kinase.
  
  
 0.406
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.