STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0566Glycosyltransferase-like; KEGG: fra:Francci3_3947 glycosyltransferases-like. (327 aa)    
Predicted Functional Partners:
Krad_0571
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.821
Krad_0013
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: rha:RHA1_ro05742 sugar transferase.
 
  
 0.813
Krad_0559
KEGG: fal:FRAAL1794 hypothetical protein; putative membrane protein; putative IMP dehydrogenase / GMP reductase domain.
 
  
 0.596
Krad_3681
PFAM: sugar transferase; KEGG: ace:Acel_1939 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.526
Krad_1048
PFAM: sugar transferase; KEGG: ace:Acel_1939 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.515
Krad_0568
PFAM: glycosyl transferase group 1; KEGG: sus:Acid_2118 glycosyl transferase, group 1.
 
    0.496
Krad_3885
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2673 O-antigen export system, ATP-binding protein.
 
  
 0.472
Krad_3886
PFAM: ABC-2 type transporter; KEGG: aau:AAur_2674 O-antigen export system permease protein.
  
  
 0.448
Krad_3679
PFAM: glycosyl transferase group 1; KEGG: xac:XAC2578 GumI protein.
 
    0.447
Krad_3812
KEGG: mpa:MAP3356c hypothetical protein.
  
    0.415
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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