STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0579PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5395 putative ABC transporter ATP-binding subunit. (324 aa)    
Predicted Functional Partners:
Krad_0580
KEGG: fal:FRAAL2980 putative ABC transporter transmembrane protein.
 
     0.946
Krad_2000
KEGG: nca:Noca_0250 putative ABC transporter transmembrane protein.
 
     0.773
Krad_1978
KEGG: sco:SCO6361 integral membrane protein.
 
     0.731
Krad_1979
KEGG: sco:SCO6361 integral membrane protein.
 
     0.723
Krad_3974
Hypothetical protein; KEGG: sco:SCO3959 possible integral membrane protein.
  
 
 0.574
Krad_3976
Hypothetical protein; KEGG: sma:SAV4249 putative integral membrane protein.
  
 
 0.496
Krad_1290
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro02589 ABC quaternary amine transporter, ATP-binding component.
 
    
0.472
Krad_3922
PFAM: ABC-2 type transporter; KEGG: nfa:nfa720 putative ABC transporter membrane protein.
 
  
 0.465
Krad_0581
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_1391 periplasmic binding protein/LacI transcriptional regulator.
       0.448
Krad_0582
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: reh:H16_A2758 altronate dehydratase.
       0.448
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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