STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0584KEGG: art:Arth_3330 hypothetical protein. (364 aa)    
Predicted Functional Partners:
Krad_0581
Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_1391 periplasmic binding protein/LacI transcriptional regulator.
       0.773
Krad_0582
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: reh:H16_A2758 altronate dehydratase.
       0.773
Krad_0583
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ace:Acel_0905 mannitol dehydrogenase, C-terminal domain.
       0.773
Krad_3479
Hypothetical protein; KEGG: mul:MUL_3476 conserved hypothetical secreted protein.
 
     0.621
Krad_0593
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: tfu:Tfu_1707 putative oxidoreductase.
 
     0.488
Krad_2693
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PE00323 hypothetical protein.
  
     0.460
Krad_0579
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5395 putative ABC transporter ATP-binding subunit.
       0.448
Krad_0580
KEGG: fal:FRAAL2980 putative ABC transporter transmembrane protein.
       0.448
Krad_3413
PFAM: Acetyl xylan esterase; KEGG: art:Arth_3303 acetyl xylan esterase.
  
     0.413
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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