STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0659Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: tfu:Tfu_1271 PAS:protein phosphatase 2C-like:GAF. (450 aa)    
Predicted Functional Partners:
Krad_0483
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family.
 
   0.854
Krad_0232
Stage II sporulation E family protein; PFAM: histidine kinase HAMP region domain protein; CHASE3 domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fra:Francci3_1176 stage II sporulation E.
 
  
 0.799
Krad_2194
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: nfa:nfa2970 hypothetical protein.
  
     0.771
Krad_0334
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
      0.677
Krad_0121
Putative PAS/PAC sensor protein; PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
 
   0.673
Krad_3520
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ace:Acel_1597 serine phosphatase.
  
     0.646
Krad_0097
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV3761 hypothetical protein.
  
   0.598
Krad_1570
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV3761 hypothetical protein.
  
   0.547
Krad_0346
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
   0.542
Krad_1003
Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sma:SAV7504 magnesium or manganese-dependent protein phosphatase.
 
  
0.515
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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