STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0671PFAM: ABC-2 type transporter; KEGG: msm:MSMEG_6765 ABC-2 type transporter superfamily protein. (278 aa)    
Predicted Functional Partners:
Krad_0672
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msm:MSMEG_6766 ABC transporter, ATP-binding protein, NodI family protein.
  
 0.970
Krad_0670
TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; KEGG: nca:Noca_0674 adenosine deaminase.
       0.722
Krad_0673
Aminotransferase class I and II; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: sco:SCO4645 aspartate aminotransferase.
  
    0.676
Krad_3922
PFAM: ABC-2 type transporter; KEGG: nfa:nfa720 putative ABC transporter membrane protein.
  
  
  0.628
Krad_3923
TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa710 putative ABC transporter ATP-binding protein.
  
 0.621
Krad_0668
PFAM: regulatory protein GntR HTH; KEGG: art:Arth_3017 transcriptional regulator, GntR family.
       0.595
Krad_0669
KEGG: art:Arth_3016 hypothetical protein.
       0.595
Krad_2017
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_3850 putative ABC transporter, ATP-binding protein.
  
 0.555
Krad_1547
PFAM: nitroreductase; KEGG: nca:Noca_4388 nitroreductase.
 
  
 0.548
Krad_1979
KEGG: sco:SCO6361 integral membrane protein.
 
  
 0.441
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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