STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0778PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: nfa:nfa19310 putative monooxygenase. (393 aa)    
Predicted Functional Partners:
Krad_2471
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mkm:Mkms_2407 monooxygenase, FAD-binding.
  
     0.755
Krad_0779
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mva:Mvan_3324 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.578
Krad_1220
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_1909 ferredoxin.
  
   
 0.464
Krad_3754
PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein.
 
 
 0.464
Krad_0780
PFAM: regulatory protein TetR; KEGG: mkm:Mkms_2422 putative transcriptional regulator, TetR family.
       0.432
Krad_0777
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: fal:FRAAL3925 hypothetical protein.
       0.429
Krad_3280
PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: fal:FRAAL5153 putative NAD dependent epimerase/dehydratase family.
 
      0.408
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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