STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0809PFAM: protein of unknown function DUF1469; KEGG: fal:FRAAL0500 hypothetical protein. (142 aa)    
Predicted Functional Partners:
Krad_0808
KEGG: cef:CE2890 hypothetical protein.
 
     0.952
Krad_0810
KEGG: aau:AAur_0122 hypothetical protein.
 
     0.951
Krad_0811
KEGG: art:Arth_3945 hypothetical protein.
       0.535
Krad_1517
TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: noc:Noc_1073 ribonuclease BN.
 
     0.489
Krad_3992
KEGG: ace:Acel_0087 hypothetical protein.
  
     0.436
Krad_1041
KEGG: mkm:Mkms_4521 conserved hypothetical protein.
  
     0.432
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.