STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0815Catalase; PFAM: manganese containing catalase; KEGG: nfa:nfa11820 putative manganese-containing catalase. (308 aa)    
Predicted Functional Partners:
Krad_0601
PFAM: protein of unknown function DUF892; KEGG: aba:Acid345_2545 protein of unknown function DUF892.
 
    0.710
Krad_3578
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.705
Krad_4460
PFAM: Radical SAM domain protein; KEGG: bha:BH2808 spore photoproduct lyase.
  
     0.687
Krad_0814
KEGG: art:Arth_3106 hypothetical protein.
 
     0.647
Krad_0816
KEGG: sma:SAV6381 endo-1,4-beta-xylanase.
       0.563
Krad_3085
KEGG: oih:OB0964 hypothetical protein.
 
     0.472
Krad_0813
PFAM: OsmC family protein; KEGG: mkm:Mkms_1194 OsmC family protein.
  
  
 0.467
Krad_1793
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aau:AAur_1866 putative alcohol dehydrogenase.
 
    0.467
Krad_4359
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nfa:nfa41080 putative dehydrogenase.
 
    0.436
Krad_0827
KEGG: mkm:Mkms_2710 radical SAM domain protein.
  
     0.403
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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