STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0884PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: art:Arth_3008 glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family. (360 aa)    
Predicted Functional Partners:
Krad_0882
Domain of unknown function DUF1794; May play a role in the intracellular transport of hydrophobic ligands.
 
    0.896
Krad_0883
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: nca:Noca_4251 ferric-uptake regulator; Belongs to the Fur family.
       0.823
Krad_0881
Hypothetical protein.
       0.762
Krad_2352
PFAM: MOSC domain containing protein; KEGG: sma:SAV4995 hypothetical protein.
      0.736
Krad_3261
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aau:AAur_2216 putative iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 
 0.733
Krad_0880
KEGG: art:Arth_3011 hypothetical protein.
 
     0.721
Krad_0110
PFAM: L-asparaginase II; KEGG: sma:SAV4025 L-asparaginase II.
      0.688
Krad_0886
KEGG: aau:AAur_0890 putative integral membrane protein.
 
     0.660
Krad_0885
KEGG: ace:Acel_0065 AmfC protein.
       0.657
Krad_3422
TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: lxx:Lxx14720 DNA polymerase III, delta subunit.
  
    0.573
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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