STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0976Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: aau:AAur_1535 oxidoreductase family, NAD-binding Rossmann fold domain protein. (379 aa)    
Predicted Functional Partners:
Krad_0975
KEGG: art:Arth_0085 hypothetical protein.
     0.964
Krad_3722
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: art:Arth_0574 xylose isomerase domain protein TIM barrel.
 
    0.817
Krad_2541
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: art:Arth_0574 xylose isomerase domain protein TIM barrel.
 
    0.808
Krad_1859
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: aau:AAur_1887 oxidoreductase family, NAD-binding Rossmann fold domain protein.
  
     0.712
Krad_0972
PFAM: extracellular solute-binding protein family 1; KEGG: msm:MSMEG_5145 extracellular solute-binding protein, family protein 1.
       0.645
Krad_0973
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0291 putative binding protein dependent transport protein.
       0.645
Krad_0974
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0088 binding-protein-dependent transport systems inner membrane component.
       0.645
Krad_3430
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: vei:Veis_3569 oxidoreductase domain protein.
  
     0.626
Krad_1858
PFAM: protein of unknown function DUF1037; KEGG: art:Arth_3683 protein of unknown function DUF1037.
 
    0.556
Krad_0388
PFAM: protein of unknown function DUF1037.
 
    0.551
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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