STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1041KEGG: mkm:Mkms_4521 conserved hypothetical protein. (72 aa)    
Predicted Functional Partners:
Krad_1040
KEGG: art:Arth_3616 hypothetical protein.
       0.623
Krad_0827
KEGG: mkm:Mkms_2710 radical SAM domain protein.
  
     0.616
Krad_0270
KEGG: xcv:XCV3887 hypothetical protein.
  
     0.608
Krad_0826
KEGG: sco:SCO0844 DNA-binding protein.
  
     0.606
Krad_4443
KEGG: rha:RHA1_ro00094 possible sugar transferase.
  
     0.578
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.556
Krad_1043
TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: art:Arth_1211 hydrolase, TatD family.
       0.555
Krad_1342
KEGG: rha:RHA1_ro06458 hypothetical protein.
  
     0.526
Krad_0382
Hypothetical protein.
 
     0.491
Krad_4444
PFAM: glycosyl transferase group 1; KEGG: rha:RHA1_ro00092 probable glycosyltransferase.
  
     0.491
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.