STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1062PFAM: glycosyl transferase group 1; KEGG: tbd:Tbd_1784 probable glycosyltransferase. (400 aa)    
Predicted Functional Partners:
Krad_1060
Hypothetical protein; KEGG: mma:MM1643 oligosaccharide repeat unit transporter.
 
    0.820
Krad_1061
Hypothetical protein.
  
    0.820
Krad_3070
PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_2362 glycosyl transferase, group 1 family protein.
  
     0.770
Krad_1055
PFAM: glycosyl transferase group 1; KEGG: tko:TK0891 glycosyltransferase, family 4.
  
     0.767
Krad_0016
PFAM: glycosyl transferase group 1; KEGG: reh:H16_A2887 glycosyltransferase, probably involved in lipopolysaccharide biosynthesis.
  
     0.766
Krad_3142
PFAM: glycosyl transferase group 1; KEGG: tfu:Tfu_2026 putative glycosyl transferase.
  
     0.714
Krad_1064
PFAM: glycosyl transferase group 1; KEGG: pab:PAB0973 LPS biosynthesis RfbU related protein.
 
    
0.690
Krad_1057
PFAM: glycosyl transferase family 2; KEGG: sus:Acid_7439 glycosyl transferase, family 2.
 
    0.674
Krad_1063
PFAM: glycoside hydrolase family 10; glycoside hydrolase family 5; KEGG: bch:Bcen2424_4202 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
       0.631
Krad_2797
PFAM: glycosyl transferase group 1; KEGG: ana:all5194 glycosyltransferase.
  
     0.592
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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