STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1108KEGG: tfu:Tfu_0458 secreted protein. (249 aa)    
Predicted Functional Partners:
Krad_1044
PFAM: protein of unknown function DUF348; Transglycosylase domain protein; G5 domain protein; KEGG: ace:Acel_0177 G5 domain protein.
    
 0.911
Krad_4164
KEGG: tfu:Tfu_2133 hypothetical protein.
 
 
 
 0.796
Krad_0273
KEGG: rha:RHA1_ro09113 hypothetical protein.
  
   0.760
Krad_3780
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.758
Krad_0272
KEGG: rha:RHA1_ro09114 hypothetical protein.
   
   0.756
Krad_1279
KEGG: tfu:Tfu_2396 putative cellulose-binding protein.
 
     0.629
Krad_1107
PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: art:Arth_1174 PhoH family protein.
       0.546
Krad_1248
SMART: protein of unknown function SprT; KEGG: nca:Noca_3805 protein of unknown function SprT.
  
    0.505
Krad_0077
PFAM: Forkhead-associated protein; KEGG: tfu:Tfu_3060 FHA domain protein.
 
     0.475
Krad_1162
KEGG: sma:SAV3104 hypothetical protein.
  
     0.459
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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