STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1129KEGG: rxy:Rxyl_0591 hypothetical protein. (215 aa)    
Predicted Functional Partners:
Krad_1130
PFAM: protein of unknown function DUF305; KEGG: nfa:pnf1480 hypothetical protein.
 
     0.954
Krad_1131
PFAM: NUDIX hydrolase; KEGG: aau:AAur_1618 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family.
       0.752
Krad_3719
PFAM: protein of unknown function DUF202; KEGG: msm:MSMEG_0174 putative inner membrane protein.
  
     0.504
Krad_3907
PFAM: GtrA family protein; KEGG: ace:Acel_0404 GtrA family protein.
  
     0.415
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.