STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1160KEGG: art:Arth_2789 hypothetical protein. (267 aa)    
Predicted Functional Partners:
Krad_1293
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rha:RHA1_ro02592 ABC amino acid transporter, substrate binding component.
  
    0.838
Krad_1157
PFAM: protein of unknown function DUF1003; KEGG: aau:AAur_2776 putative protein of unknown function (DUF1003).
       0.529
Krad_1158
MgtE intracellular region; PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: ace:Acel_1818 MgtE intracellular region.
       0.529
Krad_1159
PFAM: Ferritin Dps family protein; KEGG: sco:SCO0596 putative DNA-binding protein; Belongs to the Dps family.
  
    0.507
Krad_2925
TIGRFAM: OpcA protein; KEGG: art:Arth_2093 oxppcycle protein.
  
     0.482
Krad_1155
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.465
Krad_0476
Hypothetical protein.
  
     0.457
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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