STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1311KEGG: art:Arth_2719 hypothetical protein. (341 aa)    
Predicted Functional Partners:
Krad_1312
PFAM: GCN5-related N-acetyltransferase; KEGG: ace:Acel_1468 GCN5-related N-acetyltransferase.
       0.773
Krad_1313
PFAM: protein of unknown function DUF523; KEGG: sth:STH1078 hypothetical protein.
       0.773
Krad_3338
KEGG: ace:Acel_0882 hypothetical protein.
  
     0.720
Krad_1430
PFAM: GCN5-related N-acetyltransferase; KEGG: sma:SAV2560 putative acetyltransferase.
  
     0.709
Krad_3868
KEGG: art:Arth_1191 hypothetical protein.
 
    0.665
priA
Primosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
  
     0.645
Krad_0528
KEGG: sco:SCO3407 hypothetical protein.
  
     0.644
Krad_0936
PFAM: methylenetetrahydrofolate reductase; KEGG: art:Arth_2367 deleted entry; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.644
Krad_1170
PFAM: methylenetetrahydrofolate reductase; KEGG: fal:FRAAL2163 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.644
Krad_3256
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nca:Noca_3138 ErfK/YbiS/YcfS/YnhG family protein.
  
     0.642
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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