STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1421KEGG: aau:AAur_1508 hypothetical protein. (195 aa)    
Predicted Functional Partners:
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.828
Krad_1419
PFAM: phosphatidate cytidylyltransferase; KEGG: sco:SCO5628 putative integral membrane protein; Belongs to the CDS family.
       0.756
Krad_1175
PFAM: aminoglycoside phosphotransferase; KEGG: art:Arth_2755 aminoglycoside phosphotransferase.
  
     0.690
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.682
Krad_3191
PFAM: DivIVA family protein; KEGG: art:Arth_1578 DivIVA family protein.
  
     0.653
Krad_1281
Hypothetical protein; KEGG: ade:Adeh_0244 LigA.
  
     0.652
Krad_3697
KEGG: aau:AAur_2856 hypothetical protein.
  
     0.609
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.582
Krad_3347
KEGG: art:Arth_2470 hypothetical protein.
  
     0.487
Krad_3289
KEGG: art:Arth_1603 integral membrane protein.
  
     0.477
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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