STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1455PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_3605 sorbitol dehydrogenase. (351 aa)    
Predicted Functional Partners:
Krad_2713
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro02809 probable L-iditol 2-dehydrogenase.
  
  
 
0.906
Krad_0300
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: csa:Csal_0643 mannitol dehydrogenase-like protein.
    
 0.903
Krad_1118
PFAM: PfkB domain protein; KEGG: rha:RHA1_ro02811 fructokinase.
  
 
 0.903
Krad_4203
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mpa:MAP0879c hypothetical protein.
    
 0.903
Krad_4205
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mpa:MAP0879c hypothetical protein.
    
 0.903
Krad_3634
PFAM: FAD linked oxidase domain protein; KEGG: art:Arth_4010 FAD linked oxidase domain protein.
  
 
 0.900
Krad_1454
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msm:MSMEG_3604 sorbitol utilization protein SOU2.
 
    0.756
Krad_1453
PFAM: protein of unknown function DUF477; KEGG: msm:MSMEG_4484 putative conserved transmembrane protein.
       0.726
dxs
Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
  
    0.602
Krad_1457
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mkm:Mkms_2824 periplasmic binding protein/LacI transcriptional regulator.
  
    0.553
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.