STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1475PFAM: protein of unknown function DUF1469; KEGG: sma:SAV6345 integral membrane protein. (129 aa)    
Predicted Functional Partners:
Krad_0156
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fra:Francci3_4050 serine phosphatase.
  
     0.580
Krad_1476
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: mpa:MAP3518c hypothetical protein.
       0.536
Krad_1474
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aau:AAur_1867 glutathione-independent formaldehyde dehydrogenase.
       0.533
Krad_1570
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV3761 hypothetical protein.
  
     0.512
Krad_0097
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV3761 hypothetical protein.
  
     0.495
Krad_0104
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fra:Francci3_4050 serine phosphatase.
  
     0.473
Krad_1287
PFAM: amidohydrolase 2.
  
     0.465
Krad_4481
PFAM: protein of unknown function DUF1469; KEGG: msm:MSMEG_0697 integral membrane protein.
  
     0.463
Krad_1471
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMa0168 methyltransferase-like protein.
       0.425
Krad_1472
Kojibiose phosphorylase; PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: mva:Mvan_5750 kojibiose phosphorylase.
       0.425
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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