STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1516PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2763 ABC transporter protein, ATP-binding component. (1231 aa)    
Predicted Functional Partners:
Krad_3078
PFAM: AFG1-family ATPase; KEGG: sco:SCO6057 ATP/GTP-binding integral membrane protein.
  
    0.589
Krad_1515
PFAM: luciferase family protein; KEGG: rxy:Rxyl_3089 luciferase-like protein.
       0.561
Krad_0885
KEGG: ace:Acel_0065 AmfC protein.
  
     0.558
Krad_1517
TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: noc:Noc_1073 ribonuclease BN.
       0.554
Krad_1469
KEGG: mul:MUL_2165 conserved hypothetical secreted protein.
  
     0.527
Krad_2000
KEGG: nca:Noca_0250 putative ABC transporter transmembrane protein.
  
  0.503
Krad_1518
Hypothetical protein.
       0.487
Krad_3953
Succinate dehydrogenase hydrophobic anchor subunit-like; KEGG: art:Arth_1130 putative succinate dehydrogenase membrane subunit.
  
     0.460
Krad_3952
TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: art:Arth_1131 succinate dehydrogenase, cytochrome b subunit.
 
     0.449
Krad_3550
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_2806 ABC transporter related.
   
  
0.434
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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