STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1517TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: noc:Noc_1073 ribonuclease BN. (317 aa)    
Predicted Functional Partners:
Krad_4481
PFAM: protein of unknown function DUF1469; KEGG: msm:MSMEG_0697 integral membrane protein.
     0.901
Krad_0228
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nca:Noca_1880 HAD-superfamily hydrolase, subfamily IA, variant 1.
 
    0.891
Krad_1518
Hypothetical protein.
       0.671
Krad_1516
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2763 ABC transporter protein, ATP-binding component.
       0.554
Krad_0809
PFAM: protein of unknown function DUF1469; KEGG: fal:FRAAL0500 hypothetical protein.
 
     0.489
Krad_4010
PFAM: sodium/hydrogen exchanger; KEGG: aau:AAur_0586 putative sodium/hydrogen exchanger family protein.
 
     0.454
Krad_1515
PFAM: luciferase family protein; KEGG: rxy:Rxyl_3089 luciferase-like protein.
       0.415
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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