STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1529PFAM: protein of unknown function DUF1232; KEGG: tfu:Tfu_2752 hypothetical protein. (120 aa)    
Predicted Functional Partners:
Krad_1528
KEGG: mva:Mvan_6024 conserved hypothetical protein.
 
     0.834
Krad_0242
KEGG: tfu:Tfu_0334 hypothetical protein.
  
     0.688
Krad_1530
PFAM: UspA domain protein; KEGG: nca:Noca_2967 UspA domain protein.
       0.620
Krad_0168
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO3975 regulator.
  
     0.606
Krad_3865
PFAM: glycosyl transferase group 1; Methyltransferase type 11; KEGG: tfu:Tfu_2522 glycosyl transferase.
  
    0.577
Krad_1527
Hypothetical protein.
       0.545
Krad_4009
KEGG: mkm:Mkms_2390 putative transglycosylase associated protein.
 
     0.530
Krad_3866
PFAM: glycosyl transferase family 2; KEGG: fra:Francci3_0730 glycosyl transferase, family 2.
  
     0.488
Krad_0473
Hypothetical protein.
  
     0.435
Krad_1525
PFAM: SNARE associated Golgi protein; KEGG: art:Arth_0079 membrane protein.
       0.427
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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