STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1545KEGG: fal:FRAAL0072 hypothetical protein. (301 aa)    
Predicted Functional Partners:
Krad_1572
PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: sma:SAV7045 reductase.
  
 
 0.652
Krad_1544
TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cef:CE0106 hypothetical protein; Belongs to the peptidase M20A family.
 
    0.616
Krad_0848
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: nca:Noca_0143 thioredoxin.
   
    0.576
Krad_4505
KEGG: sma:SAV4307 hypothetical protein.
  
     0.530
Krad_3095
PFAM: regulatory protein MerR; KEGG: ace:Acel_1225 transcriptional regulator, MerR family.
  
     0.466
Krad_3286
PFAM: luciferase family protein; KEGG: nca:Noca_2313 luciferase family protein.
  
     0.459
Krad_2902
KEGG: mva:Mvan_6045 conserved hypothetical protein.
  
     0.458
Krad_2212
KEGG: rha:RHA1_ro00484 hypothetical protein.
  
   
 0.420
Krad_1288
PFAM: cysteine dioxygenase type I; KEGG: nfa:nfa4090 hypothetical protein.
  
     0.412
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.