STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1592KEGG: art:Arth_1663 secreted protein. (392 aa)    
Predicted Functional Partners:
Krad_1591
Membrane protein-like; KEGG: sma:SAV1073 hypothetical protein.
       0.773
Krad_1593
PFAM: amine oxidase; KEGG: ppu:PP_4155 hypothetical protein.
       0.762
Krad_1590
KEGG: aau:AAur_1803 hypothetical protein.
       0.614
Krad_0897
KEGG: aau:AAur_0896 putative lipoprotein.
  
     0.576
Krad_1817
KEGG: aau:AAur_2147 hypothetical protein.
  
     0.575
Krad_1589
TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: sco:SCO6061 putative oxidoreductase.
       0.555
Krad_1594
Hypothetical protein.
       0.502
Krad_3839
Putative transcriptional regulator, RpiR family; KEGG: ace:Acel_0467 sugar isomerase (SIS).
  
     0.501
Krad_1120
KEGG: art:Arth_1183 hypothetical protein.
  
     0.469
Krad_3667
PFAM: glycosyl transferase family 39; KEGG: aau:AAur_1329 putative dolichyl-phosphate-mannose-protein mannosyltransferase family protein.
  
     0.458
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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