STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Krad_1606PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: nca:Noca_2984 chemotaxis sensory transducer. (545 aa)    
Predicted Functional Partners:
Krad_0314
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein.
 
 0.976
Krad_0315
PFAM: CheW domain protein.
 
 0.975
Krad_1851
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rru:Rru_A2327 CheA signal transduction histidine kinases (STHK).
 
 0.975
Krad_1846
PFAM: CheW domain protein; KEGG: rru:Rru_A2322 CheW protein.
 
 0.966
Krad_0322
Protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type.
 0.943
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.942
Krad_1849
Protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; KEGG: rpc:RPC_4609 MCP methyltransferase, CheR-type.
 0.941
cheB-2
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.940
Krad_3403
TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: rpa:RPA4312 putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer.
   0.933
Krad_1853
PFAM: response regulator receiver; KEGG: rru:Rru_A2330 response regulator receiver domain protein (CheY).
 
 0.844
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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