STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1638TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: rxy:Rxyl_3197 ethanolamine permease. (483 aa)    
Predicted Functional Partners:
Krad_1637
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: sco:SCO1613 putative glutamine synthetase.
 
     0.743
Krad_1636
Peptidase C26; PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: msm:MSMEG_2596 peptidase C26.
 
     0.635
Krad_1634
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sma:SAV6727 short chain dehydrogenase.
 
     0.597
Krad_1633
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: msm:MSMEG_2599 GntR-family protein transcriptional regulator.
 
     0.571
Krad_1635
PFAM: aldehyde dehydrogenase; KEGG: ace:Acel_1850 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
    0.534
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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