STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1663PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: nca:Noca_0746 flagellar motor switch protein FliM. (314 aa)    
Predicted Functional Partners:
Krad_1651
PFAM: flagellar motor switch protein FliG; KEGG: nca:Noca_0758 flagellar motor switch protein FliG.
 
 0.999
Krad_1664
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: nca:Noca_0745 flagellar motor switch protein FliN.
 
 0.999
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.997
Krad_1667
PFAM: export protein FliQ family 3; KEGG: ace:Acel_0858 flagellar biosynthetic protein FliQ.
 
  
 0.993
Krad_1669
PFAM: type III secretion exporter; KEGG: nca:Noca_0740 type III secretion exporter.
 
  
 0.992
Krad_1650
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.991
Krad_1658
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ace:Acel_0849 protein of unknown function DUF1078 domain protein.
 
  
 0.990
Krad_1665
Hypothetical protein; KEGG: bur:Bcep18194_A3222 flagellar biosynthesis protein, FliO.
  
 
 0.990
Krad_1648
PFAM: protein of unknown function DUF1078 domain protein; KEGG: ace:Acel_0839 protein of unknown function DUF1078 domain protein.
 
  
 0.989
Krad_1653
ATPase, FliI/YscN family; KEGG: ace:Acel_0844 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase.
 
  
 0.989
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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