STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1671Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mag:amb3387 sensor protein FixL. (620 aa)    
Predicted Functional Partners:
Krad_1853
PFAM: response regulator receiver; KEGG: rru:Rru_A2330 response regulator receiver domain protein (CheY).
 
 
 0.989
Krad_1672
PFAM: response regulator receiver; KEGG: sth:STH2399 two-component response regulator.
 
 
 0.929
Krad_0458
PFAM: cyclic nucleotide-binding; ATP-binding region ATPase domain protein.
 
 
 0.876
Krad_1670
Multi-sensor signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: art:Arth_0116 multi-sensor signal transduction histidine kinase.
 
0.873
Krad_2299
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO7297 two-component sensor histidine kinase.
 
 
 0.871
Krad_3814
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sma:SAV5064 putative two-component system sensor kinase.
 
 
 0.840
Krad_1850
PFAM: response regulator receiver; KEGG: rru:Rru_A2326 response regulator receiver domain protein (CheY).
 
 
 0.836
Krad_0333
PFAM: response regulator receiver.
 
 
 0.821
Krad_3620
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: art:Arth_0784 two component transcriptional regulator, winged helix family.
 
 0.794
Krad_3815
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO3013 putative two-component system response regulator.
 
 
 0.793
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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