STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1773Hypothetical protein. (88 aa)    
Predicted Functional Partners:
Krad_1768
PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: fal:FRAAL2687 hypothetical protein.
       0.773
Krad_1769
TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; KEGG: aau:AAur_0002 DNA polymerase III, beta subunit.
       0.773
Krad_1770
Hypothetical protein.
       0.773
Krad_1771
Hypothetical protein.
       0.773
Krad_1772
Hypothetical protein.
       0.773
Krad_1760
RNA polymerase, sigma 28 subunit, FliA/WhiG family; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: nca:Noca_0767 RNA polymerase sigma factor, FliA/WhiG family.
       0.517
Krad_1761
Hypothetical protein.
       0.517
Krad_1762
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sfu:Sfum_2606 ParB-like partition proteins; Belongs to the ParB family.
       0.517
Krad_1763
Hypothetical protein.
       0.517
Krad_1764
Hypothetical protein.
       0.517
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.