STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1797Hypothetical protein; KEGG: ade:Adeh_2645 cellulose biosynthesis (CelD)-like protein. (389 aa)    
Predicted Functional Partners:
Krad_2232
KEGG: sus:Acid_7648 hypothetical protein.
  
     0.658
Krad_1796
Hypothetical protein.
       0.651
Krad_2605
PFAM: major facilitator superfamily MFS_1; KEGG: fal:FRAAL2293 putative ABC transporter, permease protein.
  
     0.596
Krad_2090
PFAM: extracellular solute-binding protein family 1; KEGG: msm:MSMEG_3266 maltose/maltodextrin-binding protein.
  
     0.514
Krad_2141
KEGG: rle:RL3795 hypothetical protein.
  
     0.497
Krad_1077
PFAM: protein of unknown function DUF419; KEGG: nfa:nfa3700 hypothetical protein.
  
     0.453
Krad_2147
KEGG: mes:Meso_4442 hypothetical protein.
  
     0.437
Krad_1798
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sma:SAV3824 pyridoxamine 5'-phosphate oxidase.
       0.434
Krad_1795
PFAM: rhodopsin; KEGG: gvi:gll0198 similar to bacterioopsin.
       0.431
Krad_2693
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PE00323 hypothetical protein.
  
     0.414
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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