STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1867PFAM: NUDIX hydrolase; KEGG: ace:Acel_1185 NUDIX hydrolase. (183 aa)    
Predicted Functional Partners:
Krad_3229
PFAM: Squalene/phytoene synthase; KEGG: fra:Francci3_1383 squalene/phytoene synthase.
  
  
 0.550
Krad_1869
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_4155 ABC transporter, ATPase subunit.
       0.532
Krad_1868
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: ade:Adeh_3412 secretion protein HlyD.
       0.529
Krad_1870
PFAM: protein of unknown function DUF214; KEGG: ava:Ava_2862 protein of unknown function DUF214.
       0.529
Krad_1871
PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: tfu:Tfu_1796 putative proteasome component.
       0.526
Krad_3227
PFAM: Polyprenyl synthetase; KEGG: art:Arth_1557 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
  
 0.432
Krad_3228
TIGRFAM: Zeta-phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: fal:FRAAL2160 phytoene dehydrogenase (phytoene desaturase).
  
  
 0.416
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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