STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1868TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: ade:Adeh_3412 secretion protein HlyD. (474 aa)    
Predicted Functional Partners:
Krad_1870
PFAM: protein of unknown function DUF214; KEGG: ava:Ava_2862 protein of unknown function DUF214.
 
  
 0.986
Krad_1869
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_4155 ABC transporter, ATPase subunit.
 
 
 0.954
Krad_3550
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_2806 ABC transporter related.
  
 
 0.891
Krad_1083
PFAM: protein of unknown function DUF214; KEGG: sth:STH977 ABC transporter permease protein.
 
  
 0.884
Krad_1348
PFAM: protein of unknown function DUF214; KEGG: aau:AAur_2502 putative ABC transporter permease protein.
  
  
 0.727
Krad_1871
PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: tfu:Tfu_1796 putative proteasome component.
       0.723
Krad_1964
PFAM: protein of unknown function DUF214; KEGG: sco:SCO4664 putative integral membrane protein.
 
  
 0.662
Krad_2475
PFAM: SNARE associated Golgi protein; KEGG: sco:SCO6379 hypothetical protein.
   
  
 0.578
Krad_4180
PFAM: SNARE associated Golgi protein; KEGG: sco:SCO3411 possible membrane protein.
   
  
 0.578
Krad_4182
PFAM: SNARE associated Golgi protein; KEGG: fal:FRAAL6654 putative integral membrane protein (partial match).
   
  
 0.578
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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