STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1870PFAM: protein of unknown function DUF214; KEGG: ava:Ava_2862 protein of unknown function DUF214. (398 aa)    
Predicted Functional Partners:
Krad_1869
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_4155 ABC transporter, ATPase subunit.
 
 0.997
Krad_1868
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: ade:Adeh_3412 secretion protein HlyD.
 
  
 0.986
Krad_1084
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sdn:Sden_2367 ABC transporter related.
 
 0.984
Krad_1963
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV3634 putative ABC-transporter ATP-binding protein.
 
 0.980
Krad_1349
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2501 putative ABC transporter, ATP-binding protein.
 
 0.973
Krad_4405
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3752 putative ABC transporter ATP-binding protein.
 
 0.972
Krad_2319
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO4666 putative ABC-transporter ATP-binding protein.
 
 0.968
Krad_3778
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: blo:BL1277 ATP-binding protein of ABC transporter system.
 
 0.961
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 0.919
Krad_0927
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro02230 ABC amino acid transporter, ATP-binding component.
 
      0.900
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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