STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1905PFAM: 5 nucleotidase deoxy cytosolic type C; KEGG: bpe:BP0294 putative 5'(3')-deoxyribonucleotidase. (231 aa)    
Predicted Functional Partners:
Krad_1176
PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; Zinc ribbon NADH pyrophosphatase; KEGG: sma:SAV3074 putative NADH pyrophosphatase.
  
  
  0.930
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
 
 0.924
Krad_2776
PFAM: 5'-Nucleotidase domain protein; KEGG: cyb:CYB_0274 5'-nucleotidase domain/Ser/Thr protein phosphatase family protein; Belongs to the 5'-nucleotidase family.
  
  
 0.916
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
   
 
 0.909
Krad_3944
TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; KEGG: sma:SAV3365 putative thymidine phosphorylase.
     
 0.907
Krad_4250
PFAM: thymidine kinase; KEGG: art:Arth_1631 thymidine kinase.
     
 0.905
Krad_4241
2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sco:SCO2015 putative nucleotidase; Belongs to the 5'-nucleotidase family.
     
 0.904
Krad_2992
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
  0.903
Krad_1486
PFAM: CinA domain protein; KEGG: nfa:nfa38570 putative competence-damage inducible protein; Belongs to the CinA family.
    
  0.902
Krad_2644
KEGG: fal:FRAAL3674 putative kinase.
    
  0.902
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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