STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1916PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: msm:MSMEG_6791 3-hydroxybutyryl-CoA dehydrogenase. (325 aa)    
Predicted Functional Partners:
Krad_4028
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: aau:AAur_2140 putative acetyl-coa acetyltransferase (thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
 0.997
Krad_3502
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: tfu:Tfu_1903 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.985
Krad_2609
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV492 enoyl-CoA hydratase.
 
 0.961
Krad_2883
TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: art:Arth_0490 3-oxoacid CoA-transferase, B subunit.
  
 
 0.922
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
   
 0.916
Krad_3505
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rxy:Rxyl_0375 acyl-CoA dehydrogenase-like protein.
 
 0.903
Krad_1920
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20768 hypothetical protein.
 
     0.856
Krad_0658
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: art:Arth_2741 electron transfer flavoprotein, alpha subunit.
 
 
 0.814
Krad_0657
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: art:Arth_2742 electron transfer flavoprotein beta-subunit.
 
 
 0.809
Krad_3463
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mkm:Mkms_0905 acyl-CoA dehydrogenase, type 2, C-terminal domain.
 
 
 0.787
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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