STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1937PFAM: NADPH-dependent FMN reductase; KEGG: tfu:Tfu_1931 putative oxidoreductase. (228 aa)    
Predicted Functional Partners:
Krad_1938
PFAM: luciferase family protein; KEGG: nca:Noca_2597 luciferase family protein.
 
 0.977
Krad_4421
SMART: extracellular solute-binding protein family 3; KEGG: ppu:PP_3229 periplasmic aliphatic sulfonate-binding protein, putative.
 
 
 0.943
Krad_3993
KEGG: sma:SAV1208 monooxygenase.
 
 0.937
Krad_1814
PFAM: luciferase family protein; KEGG: rha:RHA1_ro01948 possible alkanal monooxygenase.
 
 0.934
Krad_0439
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3.
  
 
 0.928
Krad_4420
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbe:GbCGDNIH1_0539 alkanesulfonates transport system permease protein.
 
 
  0.923
Krad_1932
PFAM: luciferase family protein; KEGG: lxx:Lxx23180 luciferase-like monooxygenase.
 
 0.918
ssuB
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 
 0.915
ssuB-2
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 
 0.915
Krad_0438
PFAM: binding-protein-dependent transport systems inner membrane component.
  
 
  0.913
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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